• Primers for PCR authentication
    Tnks-KO-F:TCCCATCGACCAATACATGAC Tnks-KO-R:TTCAAGCAGCTCATCCTTTCG
    2019/08/01 20:56:06
  • Mutation approach
    Replace all Tnks alleles with an insertion cassette carrying Puromycin resistance gene.
    2019/08/02 16:37:24
  • Citation
    When publishing experiments using these cell line resources, please cite the Drosophila Genomics Resource Center (NIH grant 2P40OD010949) and Drosophila RNAi Screening Center: NIH Grant 5R24OD019847, NIH NIGMS R01 GM067761, NIH ORIP R24 OD019847, NIH 5 P30 CA06516 and the relevant publications establishing these resources.
    2020/10/27 20:10:49
  • Instructions to authenticate
    Prepare Genomic DNA from cultured cells by resuspension in 100 μl of lysis buffer [10 mM tris-HCl (pH 8.2), 1 mM EDTA, 25 mM NaCl, and proteinase K (200 μg/ml)] and incubation in a thermocycler for 1 hour at 50°C followed by denaturation at 98°C for 10 min. Clone target sequences by PCR using Phusion high-fidelity DNA polymerase (New England Biolabs) according to the manufacturer’s recommendations and supplemented with an additional 2.5 mM MgCl2 (35 cycles: 96°C, 30s; 50°C, 30s; 72°C, 30s). Analyze by NGS or gel-purifiy PCR products, clone into the pCR-Blunt II-TOPO vector (Invitrogen), and transform into Top10 chemically competent cells (Invitrogen). After transformation, isolate single colonies for sequencing. For identification of mutant cell lines, analyze a minimum of 20 colonies.
    2020/10/27 20:12:18